Year 2023:
67. P Tomer, GK Shroti, S Mohapatra, D Ghosh, S Jaiswal, D Garg, D Lahiri, Kumar N, Khatri OP, Hazra Saugata*. Fabrication of HA Nano-crystal Reinforced PHAs based composites for orthopedic fracture-fixing accessories using sustainable resources. Environment, Development and Sustainability, 1-19
66. Zhabyeyev P, McLean B, Bassiouni W, Valencia R, Paul M, Darwesh AM, Seubert JM, Hazra Saugata, Oudit GY. Loss of PI3Kα Mediates Protection From Myocardial Ischemia–Reperfusion Injury Linked to Preserved Mitochondrial Function. Journal of the American Heart Association, e022352
65. Paul M, Pandey NK, Banerjee A, Shroti GK, Tomer P, Gazara RK, Thatoi H, Bhaskar T, Ghosh D, Hazra Saugata*. An insight into omics analysis and metabolic pathway engineering of lignin-degrading enzymes for enhanced lignin valorization. Bioresource Technology, 129045. https://doi.org/10.1016/j.biortech.2023.129045
64. Shroti GK, Tomer P, Hazra Saugata. Valorization of Wastewater from the Beverage Industry for Polyhydroxyalkanoate Production with Its Improved Applicability to Agricultural Use Valorization of Wastewater from the Beverage Industry for Polyhydroxyalkanoate Production with Its Improved Applicability to Agricultural Use. Water, Air, & Soil Pollution 234 (4), 269. https://link.springer.com/article/10.1007/s11270-023-06288-7.
63. Bhattacharya S, Junghare V, Hazra M, Pandey NK, Mukherjee A, Dhankhar K, Das N, Roy P, Dubey RC, Hazra Saugata*. Characterization of a Class A β-Lactamase from Francisella tularensis (Ftu-1) Belonging to a Unique Subclass toward Understanding AMR. ACS bio & med Chem Au 3 (2), 174-188
62. Junghare V, Alex R, Baidya A, Paul M, Alyethodi RR, Sengar GS, Kumar S, Singh U, Deb R, Hazra Saugata*. In silico modeling revealed new insights into the mechanism of action of enzyme 2'-5'-oligoadenylate synthetase in cattle. Journal of Biomolecular Structure and Dynamics 40 (24), 14013-14026
Year 2022:
61. S Roy, V Junghare, S Dutta, Hazra Saugata*, Sulagna Basu*. Differential Binding of Carbapenems with the AdeABC Efflux Pump and Modulation of the Expression of AdeB Linked to Novel Mutations within Two-Component System AdeRS in Carbapenem-Resistant Acinetobacter baumannii, mSystems, 2022 Jun 23;e0021722
60. S Gorai, Vivek Junghare, K Kundu, S Gharui, M Kumar, B S Patro, S K Nayak, Hazra Saugata*, S Mula*. Synthesis of Dihydrobenzofuro[3,2‐b]chromenes as Potential 3CLpro Inhibitors of SARS‐CoV‐2: A Molecular Docking and Molecular Dynamics Study, ChemMedChem, 2022, 17 (8), e202100782
Year 2021:
59. Gazal Kalyan, Vivek Junghare, Mohammad Farhan Khan, Shivam Pal, Sourya Bhattacharya, Snigdha Guha, Kaustav Majumder, Sohom Chakrabarty, Hazra Saugata. Anti-hypertensive Peptide Predictor: A Machine Learning-Empowered Web Server for Prediction of Food-Derived Peptides with Potential Angiotensin-Converting Enzyme-I Inhibitory Activity, Journal of Agricultural and Food Chemistry. 2021; 69 (49), 14995-15004
58. Vivek Junghare, Rani Alex, Apoorva Baidya, Manish Paul, Rafeeque R Alyethodi, Gyenaendra Singh Sengar, Sushil Kumar, Umesh Singh, Rajib Deb, Hazra Saugata. In silico modeling revealed new insights into the mechanism of action of enzyme 2'-5'-oligoadenylate synthetase in cattle, Journal of Biomolecular Structure and Dynamics. 2021; 40, 1-14
57. Tripti Sharma, Megha Sailwal, Diptarka Dasgupta, Hazra Saugata, Thallada Bhaskar, Debashish Ghosh. Effect of lignocellulosic biomass inhibitors on oleaginous yeast cultivation in multistage fermentation system. Bioresource Technology Reports. 2021; 15, 100791
56. Sourya Bhattacharya, Abhilek K Nautiyal, Rajanya Bhattacharjee, Aditya K Padhi, Vivek Junghare, Muskaan Bhambri, Diptarka Dasgupta, Kam YJ Zhang, Debasish Ghosh, Hazra Saugata. A comprehensive characterization of novel CYP-BM3 homolog (CYP-BA) from Bacillus aryabhattai. Enzyme and Microbial Technology. 2021; 148, 109806
55. Indu Yadav, Shiv Dutt Purohit, Hemant Singh, Sakchi Bhushan, Manoj Kumar Yadav, Thirumurthy Velpandian, Rohan Chawla, Hazra Saugata, Narayan Chandra Mishra. Vitreous substitutes: an overview of the properties, importance, and development. Journal of Biomedical Materials Research Part B: Applied Biomaterials. 2021; 109(8) 1156-1176
54. Niladri Biswas, Sandeepta Saha, Barun Kumar Biswas, Manas Chowdhury, Ashikur Rahaman, Vivek Junghare, Swati Mohapatra, Hazra Saugata, Ennio Zangrando, Ruma Roy Choudhury, Chirantan Roy Choudhury. The DNA-and protein-binding properties and cytotoxicity of a new copper (II) hydrazone Schiff base complex. Journal of Coordination Chemistry. 2021; 74 (9-10), 1482-1504
53. Sourya Bhattacharya, Aditya K Padhi, Vivek Junghare, Neeladrisingha Das, Debashish Ghosh, Partha Roy, Kam YJ Zhang, Hazra Saugata. Understanding the molecular interactions of inhibitors against Bla1 beta-lactamase towards unraveling the mechanism of antimicrobial resistance. IJBM. 2021; 177, 337-350
52. G Kalyan, V Junghare, S Bhattacharya, Hazra Saugata. Understanding structure-based dynamic interactions of antihypertensive peptides extracted from food sources, JBSD. 2021; 39 (2), 635-649
51. S Bhattacharya, V Junghare, N K Pandey, S Baidya, H Agarwal, N S Das, A Banerjee, D Ghosh, Partha Roy, Hirak K Patra, Hazra Saugata. Variations in the SDN loop of class A beta-lactamases: a study of the molecular mechanism of BlaC (Mycobacterium tuberculosis) to alter the stability and catalytic activity towards antibiotic resistance of MBIs, Front Microbiol. 2021; 12: 710291.
50. M Paul, N K Pandey, G Shroti, P Tomer, H N Thatoi, D Bhattacharya, S P Banik, D Ghosh, Hazra Saugata. Enzyme-Nanoparticle Corona: A Novel Approach, Their Plausible Applications and Challenges. Bioprospecting of Enzymes in Industry, Healthcare and Sustainable Environment, Nature Springer, 2021, 175-199
49. A Banerjee, Hazra Saugata, T Bhaskar, D Ghosh. Fusion catalyst mediated lignin valorization. Biomass, Biofuels, Biochemicals, 2021, 243-266
48. D Bandekar, S Mohapatra, M Hazra, Hazra Saugata, S Biswas, N-terminal truncation of VC0395_0300 protein from Vibrio cholerae does not lead to loss of diguanylate cyclase activity. Biophysical Chemistry, 2021, 268, 106493
Year 2020:
47. A Das, P Basak, A Pramanik, R Majumder, A Ghosh, Hazra Saugata, M Guria, M Bhattacharyya, S P Banik. Ribosylation induced structural changes in Bovine Serum Albumin: Understanding high dietary sugar induced protein aggregation and amyloid formation. Heliyon, 2020, 6 (9), e0505352020
46. R Deb, GS Sengar, V Junghare, Hazra Saugata, U Singh, R Alex, A Kumar. Characterization of a putative ribosome binding site at the 5′ untranslated region of bovine heat shock protein 90. Molecular Biology Reports, 2020,47 (9), 7061-7071
45. M Sailwal, AJ Das, RK Gazara, D Dasgupta, T Bhaskar, Hazra Saugata, D Ghosh. Connecting the dots: Advances in modern metabolomics and its application in yeast system. Biotechnology Advances, 2020, 44, 1076166
44. A Jana, SK Halder, D Dasgupta, Hazra Saugata, P Mondal, T Bhaskar, D Ghosh. Keratinase biosynthesis from waste poultry feathers for proteinaceous stain removal. ACS Sustainable Chemistry & Engineering 2020, 8 (48), 17651-17663
43. S Bhattacharya, V Junghare, NK Pandey, D Ghosh, H Patra, Hazra Saugata. An insight into the complete biophysical and biochemical characterization of novel class A beta-lactamase (Bla1) from Bacillus anthracis. International Journal of Biological Macromolecules (IJBM), 2020, 145, 510-526
42.G Kalyan, V Junghare, S Bhattacharya, Hazra Saugata. Understanding structure-based dynamic interactions of antihypertensive peptides extracted from food sources. Journal of Biomolecular Structure and Dynamics (JBSD), 2020, 1-15
41. Tripti Sharma, Diptarka Dasgupta, Preeti Sagar, Arijit Jana, Neeraj Atray, Siddharth S Ray, Debashish Ghosh, Hazra Saugata. Renewable Hydrocarbon from Biomass: Thermo-Chemical, Chemical and Biochemical Perspectives. Frontiers in Soil and Environmental Microbiology, March, 2020, 147-158
40.Swati Mohapatra, Nitish Pandey, Saikat Dey, Diptarka Dasgupta, Parsenjit Mondal, Debashish Ghosh, Hazra Saugata. Production of Biodegradable Polymers (PHAs) by Soil Microbes Utilizing Waste Materials as Carbon Source. Frontiers in Soil and Environmental Microbiology, March, 2020, 237-246
39. N Bansal, D Dasgupta, Hazra Saugata, T Bhaskar, A Ray, D Ghosh. Effect of utilization of crude glycerol as substrate on fatty acid composition of an oleaginous yeast Rhodotorula mucilagenosa IIPL32: Assessment of Nutritional Indices. Bioresource Technology, April 2020
38.Ayan Banerjee, Tripti Sharma, Abhilek K Nautiya, Diptarka Dasgupta, Hazra Saugata, Thallada Bhaskar, Debashish Ghosh. Scale-up strategy for yeast single cell oil production for Rhodotorula mucilagenosa IIPL32 from corn cob derived pentosan. Bioresource Technology April 2020
Year 2019:
37. G Kalyan, V Junghare, A Chattopadhyay, P Mitra, Hazra Saugata. Parsers, Data Structures and Algorithms for Macromolecular Analysis Toolkit (MAT): Design and Implementation. Biorxiv, 2019
36. Singh R*, Junghare V*, Hazra Saugata, Singh U, Sengar G, Raja T, Kumar S, Tyagi S, Das A, Kumar A, Koringa P, Jakhesara S, Joshi C, Deb R. Database on spermatozoa transcriptogram of catagorised Frieswal crossbred (Holstein Friesian X Sahiwal) bulls. Theriogenology; (In Press, Accepted Manuscript).
35. Sheetal Bandhu, Neha Bansal, Diptarka Dasgupta, Vivek Junghare, Arushdeep Sidana, Gazal Kalyan, Saugata Hazra, Debashish Ghosh. Overproduction of single cell oil from xylose rich sugarcane bagasse hydrolysate by an engineered oleaginous yeast Rhodotorula mucilaginosa IIPL32; 2019, Fuel; 254, 115653.
34.Omvir Singh, Tripti Sharma, Indrajit Ghosh, Diptarka Dasgupta, Bhanu Prasad Vempatapu, Saugata Hazra, Alexander L Kustov, Bipul Sarkar, Debashish Ghosh. Converting Lignocellulosic Pentosan-Derived Yeast Single Cell Oil into Aromatics: Biomass to Bio-BTX; ACS Sustainable Chemistry & Engineering, 2019, 7 (15), 13437-13445.
33. Das V, Bhattacharya S, Chikkaputtaiah C, Hazra Saugata#, Pal M#. The basics of epithelial-mesenchymal transition (EMT): A study from a structure, dynamics, and functional perspective. Journal of Cell Physiol. 2019 Feb 5. doi:10.1002/jcp.28160.
32.Bhattacharya S, Bhattacharya S, Gachhui R, Hazra Saugata, Mukherjee J. U32 collagenase from Pseudoalteromonas agarivoransNW4327: Activity, structure, substrate interactions and molecular dynamics simulations. International Journal of Biological Macromolecules (IJBM), 2019; 124:635-650.
31. Padhi A, Hazra Saugata. Insights into the role of D-amino acid oxidase mutations in amyotrophic lateral sclerosis. JCB, 2019; 120(2):2180-2197.
30. Wang Wang, Mengcheng Shen, Conrad Fischer, Ratnadeep Basu, Saugata Hazra, Pierre Couvineau, Manish Paul, Faqi Wang, Sandra Toth, Doran S Mix, Marko Poglitsch, Norma P Gerard, Michel Bouvier, John C Vederas, Josef M Penninger, Zamaneh Kassiri, Gavin Y Oudit. Apelin protects against abdominal aortic aneurysm and the therapeutic role of neutral endopeptidase resistant apelin analogs.; 2019, Proceedings of the National Academy of Sciences (PNAS) 116 (26), 13006-13015.
29. Dasgupta D, Jhungare V, Nautiyal A, Jana A, Hazra Saugata, Ghosh D. Xylitol production from lignocellulosic pentosans: a rational strain engineering approach towards a multiproduct biorefinery. Journal of Agricultural Food Chemistry (JAFC),2019, 67 (4), pp 1173–1186.
Year 2018:
28. Patel V, Zhabyeyev P, Chen X, Wang F, Paul M, Fan D, McLean B, Basu R, Zhang P, Shah S, Dawson J, Pyle W, Hazra M, Kassiri Z, Hazra Saugata, Vanhaesebroeck B, McCulloch C, Oudit G. PI3Kα-regulated gelsolin activity is a critical determinant of cardiac cytoskeletal remodeling and heart disease. Nature Communications.9, Article number: 5390 (2018).
27. Sengar G, Deb R, Singh U, Junghare V, Hazra Saugata, Raja T, Alex R, Kumar A, Alyethodi R, Kant R, Jakshara S, Joshi C. Identification of differentially expressed microRNAs in Sahiwal (Bos indicus) breed of cattle during thermal stress. Cell Stress and Chaperones, Available online 18 May 2018.
26. Pal M, Bhattacharya S, Kalyan G, Hazra Saugata. Cadherin profiling for therapeutic interventions in Epithelial Mesenchymal Transition (EMT) and tumorigenesis. Experimental Cell Research, Available online 16 April 2018.
25. Singh R, Sengar G, Singh U, Deb R, Junghare V, Hazra Saugata, Kumar S, Tyagi S, Das A, Raja T, Kumar A.Functional proteomic analysis of crossbred (Holstein Friesian × Sahiwal) bull spermatozoa. Reproduction in Domestic Animals. 2018.
Year 2017:
24. Bandhu S, Khot M, Sharma T, Sharma O, Dasgupta D, Mohapatra S, Hazra Saugata, Khatri O, Ghosh D. Single Cell Oil from Oleaginous Yeast Grown on Sugarcane Bagasse-Derived Xylose: An Approach toward Novel Biolubricant for Low Friction and Wear. ACS Sustainable Chemistry & Engineering. 2017;6(1):275-283.
23. Bandekar D, Chouhan O, Mohapatra S, Hazra M, Hazra Saugata, Biswas S. Putative protein VC0395_0300 from Vibrio cholerae is a diguanylate cyclase with a role in biofilm formation. Microbiological Research. 2017;202:61-70.
22. Das V, Kalyan G, Pal M, Hazra Saugata. Understanding the role of structural integrity and differential expression of integrin profiling to identify potential therapeutic targets in breast cancer. Journal of Cellular Physiology. 2017;233(1):168-185.
Year 2016:
21. Bharatiy S, Hazra M, Paul M, Mohapatra S, Samantaray D, Dubey R, Sanyal S, Datta S, Hazra Saugata. In Silico Designing of an Industrially Sustainable Carbonic Anhydrase Using Molecular Dynamics Simulation. ACS Omega. 2016;1(6):1081-1103.
20. Wang W, McKinnie S, Farhan M, Paul M, McDonald T, McLean B, Llorens-Cortes C, Hazra Saugata, Murray A,Vederas J, Oudit G. Angiotensin-Converting Enzyme 2 Metabolizes and Partially Inactivates Pyr-Apelin-13 and Apelin-17Novelty and Significance. Hypertension. 2016;68(2):365-377.
19. Chouhan O, Bandekar D, Hazra M, Baghudana A, Hazra Saugata, Biswas S. Effect of site-directed mutagenesis at the GGEEF domain of the biofilm forming GGEEF protein from Vibrio cholerae. AMB Express. 2016;6(1).
Year 2015:
18. Hazra Saugata*, Kurz S*, Wolff K, Nguyen L, Bonomo R, Blanchard J. Kinetic and Structural Characterization of the Interaction of 6-Methylidene Penem 2 with the β-Lactamase from Mycobacterium tuberculosis. Biochemistry. 2015;54(36):5657-5664.(* contributed equally)
17. Hazra Saugata*, Kurz S*, Bethel C, Romagnoli C, Caselli E, Prati F, Blanchard J, Bonomo R. Inhibiting the β-Lactamase of Mycobacterium tuberculosis (Mtb) with Novel Boronic Acid Transition-State Inhibitors (BATSIs). ACS Infectious Diseases. 2015;1(6):234-242. (* contributed equally)
Year 2014:
16.Basu R, Hazra Saugata, Shanks M, Paterson D, Oudit G. Novel Mutation in Exon 14 of the Sarcomere Gene MYH7 in Familial Left Ventricular Noncompaction With Bicuspid Aortic Valve. Circulation: Heart Failure. 2014;7(6):1059-1062.
15.Hazra Saugata, Xu H, Blanchard J. Tebipenem, a New Carbapenem Antibiotic, Is a Slow Substrate That Inhibits the β-Lactamase from Mycobacterium tuberculosis. Biochemistry. 2014;53(22):3671-3678.
Year 2013:
14.Hazra Saugata*, Hadi T*, Tanner M, Blanchard J. Structure of MurNAc 6-Phosphate Hydrolase (MurQ) from Haemophilus influenzae with a Bound Inhibitor. Biochemistry. 2013;52(51):9358-9366. (* contributed equally)
13. Kurz S, Wolff K, Hazra Saugata, Bethel C, Hujer A, Smith K et al. Can Inhibitor-Resistant Substitutions in the Mycobacterium tuberculosis β-Lactamase BlaC Lead to Clavulanate Resistance?: a Biochemical Rationale for the Use of β-Lactam–β-Lactamase Inhibitor Combinations. Antimicrobial Agents and Chemotherapy (AAC). 2013;57(12):6085-6096.
12. Paul M, Hazra M, Barman A, Hazra Saugata. Comparative molecular dynamics simulation studies for determining factors contributing to the thermostability of chemotaxis protein “CheY”. Journal of Biomolecular Structure and Dynamics (JBSD). 2013;32(6):928-949.
11. Quartararo C, Hazra Saugata, Hadi T, Blanchard J. Structural, Kinetic and Chemical Mechanism of Isocitrate Dehydrogenase-1 from Mycobacterium tuberculosis. Biochemistry. 2013;52(10):1765-1775.
Year 2012:
10. Xu H, Hazra Saugata, Blanchard J. NXL104 Irreversibly Inhibits the β-Lactamase from Mycobacterium tuberculosis. Biochemistry. 2012;51(22):4551-4557.
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Year 2011:
9.Hazra Saugata, Szewczak A, Ort S, Konrad M, Lavie A. Post-Translational Phosphorylation of Serine 74 of Human Deoxycytidine Kinase Favors the Enzyme Adopting the Open Conformation Making It Competent for Nucleoside Binding and Release. Biochemistry. 2011;50(14):2870-2880.
Year 2010:
8.Hazra Saugata, Konrad M, Lavie A. The Sugar Ring of the Nucleoside Is Required for Productive Substrate Positioning in the Active Site of Human Deoxycytidine Kinase (dCK): Implications for the Development of dCK Activated Acyclic Guanine Analogues. Journal of Medicinal Chemistry (JMC). 2010;53(15):5792-5800.
7.Hazra Saugata, Ort S, Konrad M, Lavie A. Structural and Kinetic Characterization of Human Deoxycytidine Kinase Variants Able To Phosphorylate 5-Substituted Deoxycytidine and Thymidine Analogues. Biochemistry. 2010;49(31):6784-6790.
Year 2009:
6.Hazra Saugata, Sabini E, Ort S, Konrad M, Lavie A. Extending Thymidine Kinase Activity to the Catalytic Repertoire of Human Deoxycytidine Kinase. Biochemistry. 2009;48(6):1256-1263.
Year 2008:
5. Sabini E, Hazra Saugata, Konrad M, Lavie A. Elucidation of Different Binding Modes of Purine Nucleosides to Human Deoxycytidine Kinase. Journal of Medicinal Chemistry (JMC). 2008;51(14):4219-4225.
4. Sabini E, Hazra Saugata, Ort S, Konrad M, Lavie A. Structural Basis for Substrate Promiscuity of dCK. Journal of Molecular Biology (JMB), 2008;378(3):607-621.
3. McSorley T, Ort S, Hazra Saugata, Lavie A, Konrad M. Mimicking phosphorylation of Ser-74 on human deoxycytidine kinase selectively increases catalytic activity for dC and dC analogues. FEBS Letters.2008;582(5):720-724.
Year 2007:
2. Sabini E, Hazra Saugata, Konrad M, Lavie A. Nonenantioselectivity Property of Human Deoxycytidine Kinase Explained by Structures of the Enzyme in Complex with L- and D-Nucleosides. Journal of Medicinal Chemistry (JMC). 2007;50(13):3004-3014.
Year 2006:
1. Sabini E, Hazra Saugata, Konrad M, Burley S, Lavie A. Structural basis for activation of the therapeutic Lnucleoside analogs 3TC and troxacitabine by human deoxycytidine kinase. Nucleic Acid Research (NAR). 2006;35(1):186-192. (Cover Page)